The following agencies and groups are working in partnership with the CKISS to achieve more effective management of invasive species in the CKISS region:
- Arrow Lakes Environmental Stewardship Society
- Backcountry Horsemen of British Columbia
- Atco Wood Products
- BC Hydro
- BC Parks
- BC Ministry of Environment
- BC Ministry of Forests, Lands, Natural Resources Operations and Rural Development
- BC Ministry of Transportation and Infrastructure
- BC Wildlife Federation
- Big Cranium Designs
- Boundary Invasive Species Society
- Celgar
- Chillbilly Sportfishing Charters
- Columbia Power Corporation
- Columbia Basin Trust
- Columbia Basin Environmental Education Network
- Columbia Basin Watershed Network
- Columbia Shuswap Invasive Species Society
- Creston Valley Beef Growers Association
- Creston Valley Wildlife Management Area
- East Kootenay Invasive Species Council
- Eastshore Freshwater Habitat Society
- Environment Canada
- Fish and Wildlife Compensation Program
- FortisBC Energy
- FortisBC Electric
- Friends of Kootenay Lake
- Golder Associates
- Hall Printing
- Idaho Department of Agriculture
- Idaho Fish and Game
- Invasive Species Council of BC
- Keefer Ecological Services Ltd.
- Kootenay Conservation Program
- Kootenay Lake Partnership
- Kootenay Weed Control
- Living Lakes Canada
- Nature Conservancy Canada
- Northwest Invasive Plant Council
- Pandion Ecological Services
- Pink Dog Designs
- PlayCleanGo.org
- Okanagan Basin Water Board
- Okanagan Nation Alliance
- Regional District Kootenay Boundary
- Regional District of Central Kootenay
- Royal BC Museum
- Salmo Watershed Streamkeepers Society
- Selkirk College
- Silverwing Ecological Consulting
- Slocan Lake Stewardship Society
- Sharp Shop – Premium Sharpening Services
- SpeedPro Nelson
- Teck Resources Ltd.
- Thompson Rivers University
- TreeBear Native Plants and Ecological Services
- US Forest Service
- VAST Resource Solutions
- West Kootenay EcoSociety
- West Kootenay Fly Fishing Club
- West Kootenay ATV Club
- Wildlife Habitat Canada
- Wildsight